vcrun6 msls31 and gdiplus all seem unnecessary, and in fact gdi seems to significantly slow down Quicken. Microsoft fonts, Internet Explorer 6 or higher and .Net 2 or higher seem to be all that's needed with wine 1.6 or higher.
Manual and automatic updates can fail if host system is connected to the internet during original installation and during any automatic or manually downloaded & applied updates. Try updating manually with host internet disabled. Quicken automatic software updates should be disabled.
If running on a 64 bit machine, force 32 bit in wine via environment variable as some versions of wine have issues on 64 bit machines. (eg "WINEARCH=win32 wine ....")
If installing on a multiple core system, run all operations on a single core only as multiple core operations do not seem to be well managed under wine + Quicken. (eg, "numactl --physcpubind=+1 wine ...")