WineHQ

CloneManager

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Application Details:

Version: 9.0 Professional
License: Retail
URL:  
Votes: 0
Latest Rating: Silver
Latest Wine Version Tested: 1.6.1

Maintainers: About Maintainership

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Test Results

Old test results
The test results for this version are very old, and as such they may not represent the current state of Wine. Please consider submitting a new test report.
Selected Test Results

What works

  • Files: (finally works)
    • Saving cm5 files
    • Loading cm5 files
    • Export
      • Send to file
        • Sequence only
        • Commented GenBank
    • Import from clipboard
  • View
    • Map
    • Restriction Map
    • Sequence
    • Features
    • Info
    • Zoom
    • Send view to file
      • htm
      • rtf
      • txt
  • Sequences
    • Edit sequence manually
  • Discover
    • Open reading frames
  • Operations
    • Process Molecule
      • Invert molecule
      • circularize molecule
    • Primer values profile
  • Clone
    • Find enzyme sites
      • find single cutters works
    • Cut with
      • Enzyme
      • Base Position
    • Ligate
      • Ambiguous orientation is detected
    • Modify ends
      • Custom
      • Klenow fill-in
      • 3'-5' exo
    • Auto Scan
  • Primer
    • Primer List
      • Add primer
    • Analyze
      • One primer analysis
      • Primer pair analysis
      • All primer tests seem to work
    • Find primers that bind
      • finds correct primers and displays them in sequence and map
    • Create product
  • Visualizations
    • Map
      • Displays linear and circular DNA
      • Displays ORFs
      • Displays enzyme sites
      • Displays primers
      • Enhanced View
        • Copy hi-Res Bitmap to Clipboard
        • Export to BMP
        • Export to PNG
        • Change text font size and style
        • Change feature style and color
      • Enzyme sites
        • wipe all
      • Primer sites
        • wipe all
    • Sequence visualization
      • Displays enzyme sites (beware, not sure if this works 100%)
      • Displays primer sites
      • Displays modified ends after enzyme treatment
  • Features panel
    • displays ORFs
    • displays regions
    • displays labels
  • Discover
    • Blast Internet search: surprisingly this also worked. Working sequence was transmitted and BLAST report was accessible through internal browser. Works, but reaction was sluggish.
  • Window
    • Cascade
    • Tile horizontally
    • Tile vertically
    • Arrange icons

What does not

  • Visualizations
    • Export to JPG
    • Export to TIFF
    • --> image distorted when opened in GIMP 2.
  • Operations
    • Compare to sequences
      • Assembled: strange character at +1
      • Editing (Pencil symbol) led to the error: "An invalid argument was encountered"
  • View
    • Send view to clipboard

Workarounds

What was not tested

All the rest of the features.

Hardware tested

Graphics:

  • GPU:
  • Driver:

Additional Comments

CloneManager finally runs almost flawlessly on Linux :) Ubunutu 12.04.4 LTS precise IN VIRTUAL BOX Native wine package from Ubuntu 12.04 is too old (as of 2014/04/12) and does not work with CloneManager. Instead I installed Winehq from third party binaries from https://launchpad.net/~ubuntu-wine/+archive/ppa/+sourcepub/3740586/+listing-archive-extra No extra configuration neccessary!

selected in Test Results table below
Operating systemTest dateWine versionInstalls?Runs?Used
Workaround?
RatingSubmitter
CurrentUbuntu 12.04 "Precise" amd64 (+ variants like Kubuntu)Apr 12 20141.6.1Yes Yes SilverChris 

Known Bugs

Bug # Description Status Resolution Other apps affected

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